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  Effects of zooplankton carcasses degradation on freshwater bacterial community composition and implications for carbon cycling

Kolmakova, O. V., Gladyshev, M. I., Fonvielle, J. A., Ganzert, L., Hornick, T., Grossart, H.-P. (2019): Effects of zooplankton carcasses degradation on freshwater bacterial community composition and implications for carbon cycling. - Environmental Microbiology, 21, 1, 34-49.
https://doi.org/10.1111/1462-2920.14418

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 Creators:
Kolmakova, Olesya V.1, Author
Gladyshev, Michail I.1, Author
Fonvielle, Jérémy André1, Author
Ganzert, L.2, Author              
Hornick, Thomas1, Author
Grossart, Hans-Peter1, Author
Affiliations:
1External Organizations, ou_persistent22              
23.7 Geomicrobiology, 3.0 Geochemistry, Departments, GFZ Publication Database, Deutsches GeoForschungsZentrum, ou_146043              

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 Abstract: Non‐predatory mortality of zooplankton provides an abundant, yet, little studied source of high quality labile organic matter (LOM) in aquatic ecosystems. Using laboratory microcosms, we followed the decomposition of organic carbon of fresh 13C‐labelled Daphnia carcasses by natural bacterioplankton. The experimental setup comprised blank microcosms, that is, artificial lake water without any organic matter additions (B), and microcosms either amended with natural humic matter (H), fresh Daphnia carcasses (D) or both, that is, humic matter and Daphnia carcasses (HD). Most of the carcass carbon was consumed and respired by the bacterial community within 15 days of incubation. A shift in the bacterial community composition shaped by labile carcass carbon and by humic matter was observed. Nevertheless, we did not observe a quantitative change in humic matter degradation by heterotrophic bacteria in the presence of LOM derived from carcasses. However, carcasses were the main factor driving the bacterial community composition suggesting that the presence of large quantities of dead zooplankton might affect the carbon cycling in aquatic ecosystems. Our results imply that organic matter derived from zooplankton carcasses is efficiently remineralized by a highly specific bacterial community, but does not interfere with the bacterial turnover of more refractory humic matter.

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 Dates: 2019
 Publication Status: Finally published
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 Identifiers: DOI: 10.1111/1462-2920.14418
GFZPOF: p3 PT3 Earth Surface and Climate Interactions
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Title: Environmental Microbiology
Source Genre: Journal, SCI, Scopus
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Pages: - Volume / Issue: 21 (1) Sequence Number: - Start / End Page: 34 - 49 Identifier: CoNE: https://gfzpublic.gfz-potsdam.de/cone/journals/resource/journals124